hspe: hybrid-scale proportions estimation

a method for cell-type deconvolution

Software

hspe is an R package for cell type deconvolution.

• The R package is available here.

Vignettes

• An example of how to hspe is available here here (html rmd)

Papers

1. “The Role of Scale in the Estimation of Cell-type Proportions” (Pre-print)

• Our new pre-print on the role of scale in cell-type deconvolution is accessible here

• Our docker image for reproducing the analysis in paper can be found here.